Species Programs Open science · NCBI / GenBank

14 species.
Open methods.

De-extinction research programs identified for future genomic work. No active sequencing programs have begun — the tools we're building now are the infrastructure these programs will run on when the science is ready. Every dataset, pipeline, and result is publicly available and peer-reviewable.

Pleistocene megafauna · ~10,000–14,000 BP
Pleistocene · ~4,000 BPPlanned
Elephantidae · Proboscidea
Woolly Mammoth
Mammuthus primigenius

The most genomically tractable de-extinction target. A high-quality genome, a close living relative in the Asian elephant, and well-mapped cold-adaptation loci make the mammoth the benchmark for the field. Permafrost specimens have yielded high-coverage nuclear genome data available in NCBI.

High-coverage genomeAsian elephant proxyRead more →
Pleistocene · ~14,000 BPPlanned
Rhinocerotidae · Perissodactyla
Woolly Rhinoceros
Coelodonta antiquitatis

Population stable until ~14,000 BP, when rapid climate shift and human pressure converged. Ancient RNA data exists for this species, opening gene-expression research impossible with DNA alone. One of the more data-rich Pleistocene targets.

Nuclear genomeAncient RNARead more →
Pleistocene · ~11,000 BPPlanned
Tremarctinae · Carnivora
Short-Faced Bear
Arctodus simus

The largest terrestrial carnivore in North American history. Permafrost specimens from Alaska and the Yukon are the primary aDNA source, with the spectacled bear as the extant reference genome.

Permafrost specimensSpectacled bear proxyRead more →
Pleistocene · ~13,000 BPPlanned
Felidae · Carnivora
Cave Lion
Panthera spelaea

The largest lion ever, depicted in the oldest known paintings at Chauvet Cave. Two permafrost-preserved cubs yielded extraordinary nuclear genome data. Closely related to the African lion, making it one of the more tractable large-predator targets.

Permafrost genomeAfrican lion proxyRead more →
Pleistocene · Extinct ~7,700 BPPlanned
Cervidae · Artiodactyla
Irish Elk
Megaloceros giganteus

The largest deer that ever lived, with antlers spanning 3.7 meters. Ranged from Ireland to China across Eurasian steppe. Ancient DNA from bog and permafrost specimens is accumulating in NCBI. Phylogenetically closest to fallow deer, with divergence ~3–4 million years ago.

aDNA · bog specimensFallow deer proxyRead more →
Pleistocene · Extinct ~9,500 BPPlanned
Canidae · Carnivora
Dire Wolf
Aenocyon dirus

North America's apex canid predator for over a million years. Recent genomic work overturned its classification, revealing it as a deeply divergent lineage — not a giant gray wolf, but a separate genus that last shared a common ancestor with wolves ~5.7 million years ago.

Ancient DNA recoveredCanid comparative genomicsRead more →
Historical extinctions · 1440–1972
Historical · Extinct 1883Planned
Equidae · Perissodactyla
Quagga
Equus quagga quagga

The species that launched the ancient DNA field in 1984. Its genes still exist in living zebra populations, making it among the most accessible genomic targets. A model system for pigmentation genetics research.

Full genomeStripe-pattern lociRead more →
Historical · Extinct 1936Planned
Thylacinidae · Dasyuromorphia
Thylacine
Thylacinus cynocephalus

A marsupial that evolved to look and hunt like a wolf. The most genomically characterized de-extinction target in existence — full genome, ancient RNA, active programs at Melbourne and Colossal. We build open-source computational tools to extend the science beyond any single organization.

Full genome + RNAFat-tailed dunnart proxyRead more →
Historical · Extinct c. 1681Planned
Columbidae · Columbiformes
Dodo
Raphus cucullatus

A giant flightless pigeon, extinct within 80 years of human contact. The 2022 nuclear genome opened serious de-extinction research for the first time. Closest living relative is the Nicobar pigeon, which serves as the primary genomic reference.

2022 nuclear genomeNicobar pigeon proxyRead more →
Historical · Extinct 1914Planned
Columbidae · Columbiformes
Passenger Pigeon
Ectopistes migratorius

Once the most abundant bird on Earth at 3 to 5 billion individuals. Hunted to extinction in 50 years. Museum specimens yield high-coverage genomic data. Closely related to the band-tailed pigeon. The Allee effect explains why abundance could not protect it.

High-coverage genomeBand-tailed pigeon proxyRead more →
Historical · Extinct in wild c. 1942Planned
Felidae · Carnivora
Barbary Lion
Panthera leo leo

The largest lion subspecies, ranging across North Africa from Egypt to Morocco. Eliminated by colonial hunting in the Atlas Mountains within a century of modern rifle introduction. A genetically distinct lineage from sub-Saharan African lions, with potential captive descendants at Rabat Zoo.

Museum specimen DNAPanthera leo referenceRead more →
Historical · Extinct in wild c. 1970Planned
Felidae · Carnivora
Caspian Tiger
Panthera tigris virgata

A large, cold-adapted tiger of Central Asian river valleys, eradicated by Soviet policy in the 1940s and 1950s. Genomic analysis confirms near-identity with the living Amur tiger, raising the possibility of ecological restoration with a living proxy rather than genomic reconstruction.

Museum specimen DNAAmur tiger proxyRead more →
Historical · Extinct ~1440 CEPlanned
Dinornithidae · Dinornithiformes
Giant Moa
Dinornis robustus

The largest ratite ever, reaching 3.6 meters. Hunted to extinction within 160 years of human arrival in New Zealand. Among the best-documented human-caused extinctions on record. High-quality ancient DNA is recoverable from preserved specimens, and close ratite relatives provide genomic scaffolding.

aDNA · museum specimensRatite reference genomesRead more →
Historical · Extinct 1952Planned
Phocidae · Carnivora
Caribbean Monk Seal
Neomonachus tropicalis

The only seal native to the Caribbean and Gulf of Mexico, hunted to extinction by the mid-20th century. The last confirmed sighting was 1952. Closely related to the endangered Hawaiian and Mediterranean monk seals, whose genomes provide a strong reference framework for genomic reconstruction.

Museum specimen DNAHawaiian monk seal proxyRead more →